Therefore, my research question is: Is the use of
Lianhua Qingwen block the replication of the
COVID-19 virus? And my hypothesis is I predict that
Chinese Medicine Lianhua Qingwen helps to block
replication of COVID-19. I will treat lung cells from
COVID infected human patients with an increasing
amount of Lianhua Qingwen (0mg/mL which is the
buffer solution, 0.1 mg/mL, 0.3 mg/mL, 0.5 mg/mL,
0.7 mg/mL, and 1 mg/mL) for the various durations
(12h, one day, three days, and seven days) and
measure it by CPE inhibition assay and plaque assay
with 10 replicates.
2 METHOD
2.1 Materials
This experiment will use COVID-19 infected cells
(experiment cells) from patients, and the growth of
cells was supported at 37 °C by Dulbecco’s Modified
Eagle’s medium (DMEM) along with fetal bovine
serum at the concentration of 10 %. The infection
experiments were conducted in a biosafety level-3
laboratory for safety concerns. Lianhua Qingwen
capsules were obtained and the black powder of it
was removed from the capsules. The black powders
were dissolved in dimethyl sulfoxide first to 200
mg/mL. Next, at room temperature mix the solution
by shake or stir it for 30 minutes, and prepare the
stock solution by diluting the Lianhua Qingwen
solution with serum-free DMEM to the concentration
of 0.1 mg/mL, 0.3 mg/mL, 0.5 mg/mL, 0.7 mg/mL
and 1 mg/mL, and at the temperature of −20 °C
reserve it. Additionally, preparing Remdesivir
solution with a similar method by dissolved in
dimethyl sulfoxide and mix to the concentration of
100 mM and stored at −20 °C with the Lianhua
Qingwen solution, and the dilution buffer that used in
later experiments is prepared by DMEM with 2%
fetal bovine serum. Materials like 96-well plates,
0.6 % agar, timer, thermometer, and microscope are
also needed in the following experiment.
2.2 Cytopathic Effect (CPE) Inhibition
Assay
The cytopathic effect is observable abnormalities
such as structural changes in host cells that are caused
by the viral invasion, and different viruses infect
different types of cells will cause different cytopathic
effects. CPEs are important aspects of a viral
infection in diagnostics. The CPE assay is used to test
if a compound exhibits any antiviral efficacy or not.
CPE assay is a cost-effective and time-efficient assay
that we used to evaluate test articles' ability to inhibit
CPE. Many combinations of cells and viruses can be
used to measure interferon activity via CPE assay.
And by using the dose-response assay we are able to
tell the selected antiviral efficacy range (Britannica
2019).Put experiment cells in monolayers inside
separate 96-well plates. To explore the effectiveness
against experiment virus of Lianhua Qingwen, in the
experiment group, the infected cells were incubated
with Lianhua Qingwen solution at various
concentrations for different durations (12h, one day,
three days, and seven days). Then, the positive
control group was developed at the different
concentrations of Remdesivir solution mentioned
before. As for the negative control group, grow the
experiment cells with indicated concentrations of
solely buffer solution (which contains 0 mg/mL of
Lianhua Qingwen). After various times of incubation
in these different solutions, the infected experiment
cells will show full CPE under the microscope
(100%). Next, the CPE at different percentages in all
three groups with different solutions treated cells
were recorded. Also, 10 replicates will be done for
this experiment, and by using the Reed-Muench
method we will be able to calculate IC50 which is the
half virus-induced CPE of inhibition concentration
for all the experiments and the calculated IC50 will
be compared later (Li et al. 2020).
2.3 Plaque Reduction Assay
Plaque assay is a way of measuring virus quantity that
is used to test the concentration of virus’s dose of
infection, and it specifies the quantity of appeared
units of plaque in the test sample of viruses. A
monolayer of infected cells at different
concentrations and covered with a semi-solid
medium (we will use agar in this experiment), to
forestall the infection of virus from spreading
randomly. When a certain virus passes infection to a
cell monolayer the infected cell area will create a
plaque. The culture will then be stained with a dye,
which stains only viable cells. We will use 1% crystal
violet in this experiment. As a result, the plaque (the
dead cells) will appear unstained against the colored
background for researchers to count (Kaufmann,
Kabelitz 2002). The SARS-CoV-2 infected cells were
put in monolayers and were put in 96-well plates
separately. And for all three groups, the plates were
all covered with 0.6 % agar, 2% fetal bovine serum.
Next, for each of the individual groups, the plate was
covered with the different concentrations of either